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中国防痨杂志 ›› 2013, Vol. 35 ›› Issue (3): 173-178.

• 论著 • 上一篇    下一篇

耐异烟肼和链霉素的结核分枝杆菌临床分离株与敏感株差异蛋白表达研究

何秀云 朱传智 逄宇 黄香玉 蒋丽气 赵雁林 庄玉辉   

  1. 100091  北京,解放军第三Ο九医院 器官移植与免疫调节北京市重点实验室(何秀云、朱传智、黄香玉、蒋丽气、庄玉辉);中国疾病预防控制中心结核病预防控制中心  国家结核病参比实验室(逄宇、赵雁林)
  • 收稿日期:2012-11-28 出版日期:2013-03-10 发布日期:2013-03-14
  • 通信作者: 何秀云;赵雁林 E-mail:xwhe@sohu.com; zhaoyanlin@chinatb.org
  • 基金资助:

    “十一五”国家重大科技专项(2008ZX10003-009)

Quantitative proteomic analyses of isoniazid- and streptomycin-resistant and sensitive clinical isolates and H37Rv of Mycobacterium tuberculosis

HE Xiu-yun,ZHU Chuan-zhi, PANG Yu, HUANG Xiang-yu, JIANG Li-qi, ZHAO Yan-lin, ZHUANG Yu-hui   

  1. Beijing Key Lab of Transplantation and Immune Regulation, the 309th Hospital of PLA, Beijing 100091,China
  • Received:2012-11-28 Online:2013-03-10 Published:2013-03-14
  • Contact: HE Xiu-yun;ZHAO Yan-lin E-mail:xwhe@sohu.com; zhaoyanlin@chinatb.org

摘要: 目的  鉴定结核分枝杆菌对异烟肼和链霉素耐药相关的潜在蛋白。 方法  以药物敏感株(01105)和标准株H37Rv为对照,核素标记相对和绝对定量(isobaric tags for relative and absolute quantitation, iTRAQ)结合Nano液相色谱-串联质谱分析仪(LC-MS-MS)技术和生物信息学,鉴定并相对定量结核分枝杆菌对异烟肼与链霉素耐药的临床分离株02166菌体蛋白。 结果 02166菌株分别与01105菌株和H37Rv菌株比较差异表达蛋白为153个和130个,02166菌株与01105菌株和H37Rv比较差异表达蛋白均为86个(共同差异表达蛋白)。差异表达蛋白理论相对分子质量和等电点分布广泛,相对分子质量从7.63~326.22,等电点从3.74~12.48,其主要参与中间代谢、呼吸作用和脂类代谢。共同差异表达蛋白:9个核糖体蛋白(Rv0056、Rv0651、Rv0652、Rv0701、Rv0719、Rv1630、Rv2785c、Rv2909c和Rv3458c)在02166菌株中表达下调;5个蛋白(Rv0234c、Rv2466c、Rv2626c、Rv2986c和Rv3118)在02166菌株中呈显著差异表达,其中琥珀酸半醛脱氢酶(Rv0234c)和假定未知蛋白(Rv2466c)在02166菌株中表达上调倍数>1.2,DNA结合蛋白HU同系物hupB(Rv2986c)、假定未知蛋白(Rv2626c和Rv3118)在02166菌株中表达下调倍数<0.5。 结论 iTRAQ发现了耐异烟肼和链霉素的结核分枝杆菌临床分离株差异表达蛋白,为进一步探讨结核分枝杆菌异烟肼或链霉素耐药机制奠定了基础。

关键词: 分枝杆菌, 结核, 异烟肼, 链霉素, 蛋白质组学

Abstract: Objective To identify the proteins differentially expressed in isoniazid- and streptomycin-resistant Mycobacterium tuberculosis clinical isolate (INH/Sr isolate) compared with drug-sensitive clinical isolate (INH/Ss isolate) and H37Rv. Methods Whole cellular proteins were extracted from the INH/Sr isolate 02166, the INH/Ss isolate 01105 and H37Rv of M. tuberculosis, respectively. The proteins were digested with trypsin. The peptides were labeled, separated and identified by isobaric tags for relative and absolute quantitation (iTRAQ) combined with Nano LC-MS-MS technology. The bioinformatics were used to identify and quantify the proteins. Results One hundred and fifty three and 130 proteins were found differential expression in 02166 strain compared with 01105 strain and H37Rv, respectively, including 86 proteins in 02166 strain compared with both 01105 strain and H37Rv. The theoretical molecular weight and isoelectric point of differentially expressed proteins ranged from 7.63 to 326.22 and from 3.74 to 12.48, respectively. Differentially expressed proteins were mainly associated with intermediary metabolism, respiration, and lipid metabolism. Nine ribosomal proteins (Rv0056, Rv0651, Rv0652, Rv0701, Rv0719, Rv1630, Rv2785c, Rv2909c and Rv3458c) were commonly down-regulated in 02166 strain compared with both 01105 and H37Rv. Succinate-semialdehyde dehydrogenase (Rv0234c) and putative uncharacterized protein (Rv2466c) were common up-regulation (the ratios>1.2), and probable DNA-binding protein HU homolog hupB (Rv2986c) and putative uncharacterized protein (Rv2626c and Rv3118) were down-regulation (the ratios <0.5) in 02166 strain compared with both 01105 strain and H37Rv. Conclusion Differentially expressed proteins were identified in INH/Sr isolate compared with INH/Ss isolate and H37Rv using iTRAQ. Further study will focus on the above proteins playing role in INH or S resistance.

Key words: Mycobacterium tuberculosis, Isoniazid, Streptomycin, Proteomics